Viash Catalogue

The open-source catalogue on Viash Hub offers a collection of publicly available data workflows, modules, and tools that users can freely access, modify, and integrate into their projects.

Keywords

Biotech Research Collaboration, Computational Workflow Centralization, Bioinformatics Script Repository, R&D Knowledge Sharing, Efficient Pipeline Development

An Extensive Catalogue of Open Source Biotech Tools on Viash Hub

Viash Catalogue

Viash Catalogue workflows and analyses are ready for immediate use and deployment via Viash Hub.

It provides a comprehensive collection of high-quality, industry-ready modules and biotech data workflows, suitable for standalone use or integration into larger workflows.

All Viash Catalogue modules are available for project use ahead of the official public launch of Viash Hub — Contact Us

Quality

Our workflows meet strict professional standards, often developed in large client projects, ensuring they are secure, reliable, and industry-ready.

Industry Ready

All Viash modules are robust, scalable, and compliant, ensuring seamless integration, reproducability, and alignment with industry standards for professional data workflows.

Viash Modules

All tools in the catalogue are Viash Modules, ensuring standardized, ready-to-use and robust solutions for your workflows.

Open Source

Every tool and workflow is open source and free to use, ensuring community-driven, collaborative development and accessibility.

Viash Catalogue Example: Open Pipeline

OpenPipelines offers best-practice workflows for processing single-cell and multi-omics data , developed in collaboration with a leading pharmaceutical company.
Designed to be modular and open-source, it supports effortless customisation and seamless integration.

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Modular Base
Components

(Sub-) Workflows

Modalities
RNA, Protein, VDJ,ATAC
coming soon: Spatial

Technologies
10X, BD Rhap, Smart-Seq2.
More coming soon!

Viash Catalogue: Powered by Viash Hub

Viash Hub Viash Hub Private

Extensive Catalogue

Our extensive catalogue features state-of-the-art data workflows and biotech tools, all ready for use and easily accessible through the Viash Hub platform.

Demultiplex

A workflow to demultiplex high-throughput sequencing reads.

Biobox

A collection of bioinformatics tools for working with sequence data.

Toolbox

A collection of commandline tools ready for use in data analysis.

Open Pipeline

Best practice workflows for single-cell, multi-omics data.

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High-Throughput RNA-seq pipeline

A workflow designed to process and analyse high-throughput RNA sequencing data.

nf-core/rnaseq

A version of the nf-core/rnaseq pipeline (version 3.14.0) in the Viash framework. Easy to reuse and easy to run.

Elevate your data workflows

Transform your data workflows with Data Intuitive’s complete support from start to finish.

Our team can assist with deﬁning requirements, troubleshooting, and maintaining the ﬁnal product, all while providing end-to-end support.